More data. It seems that the original image and the reconstructed image are the same with the bounded region, but outside it they have different opacity values.
As far as I can see the images have page size of 612x792, but the actual (bounded) image sizes are 70x46.
The opacity is 0 vs 65535.
(gdb) p *image
$41 = {storage_class = DirectClass, colorspace = sRGBColorspace, compression = UndefinedCompression, quality = 0, orientation = UndefinedOrientation, taint = MagickFalse, matte = MagickTrue,
columns = 612, rows = 792, depth = 8, colors = 0, colormap = 0x0, background_color = {blue = 65535, green = 65535, red = 65535, opacity = 0}, border_color = {blue = 57311, green = 57311,
red = 57311, opacity = 0}, matte_color = {blue = 48573, green = 48573, red = 48573, opacity = 0}, gamma = 0.45455000000000001, chromaticity = {red_primary = {x = 0.64000000000000001,
y = 0.33000000000000002, z = 0}, green_primary = {x = 0.29999999999999999, y = 0.59999999999999998, z = 0}, blue_primary = {x = 0.14999999999999999, y = 0.059999999999999998, z = 0},
white_point = {x = 0.31269999999999998, y = 0.32900000000000001, z = 0}}, rendering_intent = PerceptualIntent, profiles = 0x805ff8e60, units = UndefinedResolution, montage = 0x0,
directory = 0x0, geometry = 0x0, offset = 0, x_resolution = 72, y_resolution = 72, page = {width = 612, height = 792, x = 0, y = 0}, extract_info = {width = 70, height = 46, x = 0, y = 0},
tile_info = {width = 0, height = 0, x = 0, y = 0}, bias = 0, blur = 1, fuzz = 0, filter = UndefinedFilter, interlace = NoInterlace, endian = UndefinedEndian, gravity = UndefinedGravity,
compose = OverCompositeOp, dispose = UnrecognizedDispose, clip_mask = 0x0, scene = 0, delay = 0, ticks_per_second = 100, iterations = 0, total_colors = 0, start_loop = 0, error = {
mean_error_per_pixel = 0, normalized_mean_error = 0, normalized_maximum_error = 0}, timer = {user = {start = 123.28125, stop = 0, total = 0}, elapsed = {start = 2547347.234375, stop = 0,
total = 0}, state = RunningTimerState, signature = 2880220587}, progress_monitor = 0, client_data = 0x0, cache = 0x8060cd000, attributes = 0x0, ascii85 = 0x0, blob = 0x804c6f800,
filename = "/var/tmp/magick-jzAGNRsI\000RsI\000\000\060\060\061", '\000' <repeats 4062 times>, magick_filename = "EPI:/var/tmp/magick-vmGuvYhC\000\060\060\060\061", '\000' <repeats 4062 times>,
magick = "EPI", '\000' <repeats 4092 times>, magick_columns = 612, magick_rows = 792, exception = {severity = UndefinedException, error_number = 0, reason = 0x0, description = 0x0,
exceptions = 0x806064a80, relinquish = MagickFalse, semaphore = 0x80e7fe580, signature = 2880220587}, debug = MagickFalse, reference_count = 1, semaphore = 0x80e7febc0, color_profile = {
name = 0x0, length = 2576, info = 0x8064b3000 "", signature = 0}, iptc_profile = {name = 0x0, length = 0, info = 0x0, signature = 0}, generic_profile = 0x0, generic_profiles = 0,
signature = 2880220587, previous = 0x0, list = 0x0, next = 0x0, interpolate = UndefinedInterpolatePixel, black_point_compensation = MagickFalse, transparent_color = {blue = 0, green = 0, red = 0,
opacity = 65535}, mask = 0x0, tile_offset = {width = 0, height = 0, x = 0, y = 0}, properties = 0x805ff8ec0, artifacts = 0x0, type = UndefinedType, dither = MagickTrue, extent = 3014656,
ping = MagickFalse, channels = 0}
(gdb) p *reconstruct_image
$42 = {storage_class = DirectClass, colorspace = sRGBColorspace, compression = UndefinedCompression, quality = 0, orientation = UndefinedOrientation, taint = MagickFalse, matte = MagickTrue,
columns = 612, rows = 792, depth = 8, colors = 0, colormap = 0x0, background_color = {blue = 65535, green = 65535, red = 65535, opacity = 0}, border_color = {blue = 57311, green = 57311,
red = 57311, opacity = 0}, matte_color = {blue = 48573, green = 48573, red = 48573, opacity = 0}, gamma = 0.45455000000000001, chromaticity = {red_primary = {x = 0.64000000000000001,
y = 0.33000000000000002, z = 0}, green_primary = {x = 0.29999999999999999, y = 0.59999999999999998, z = 0}, blue_primary = {x = 0.14999999999999999, y = 0.059999999999999998, z = 0},
white_point = {x = 0.31269999999999998, y = 0.32900000000000001, z = 0}}, rendering_intent = PerceptualIntent, profiles = 0x805ff8da0, units = UndefinedResolution, montage = 0x0,
directory = 0x0, geometry = 0x0, offset = 0, x_resolution = 72, y_resolution = 72, page = {width = 612, height = 792, x = 0, y = 0}, extract_info = {width = 70, height = 46, x = 0, y = 0},
tile_info = {width = 0, height = 0, x = 0, y = 0}, bias = 0, blur = 1, fuzz = 0, filter = UndefinedFilter, interlace = NoInterlace, endian = UndefinedEndian, gravity = UndefinedGravity,
compose = OverCompositeOp, dispose = UnrecognizedDispose, clip_mask = 0x0, scene = 0, delay = 0, ticks_per_second = 100, iterations = 0, total_colors = 0, start_loop = 0, error = {
mean_error_per_pixel = 0, normalized_mean_error = 0, normalized_maximum_error = 0}, timer = {user = {start = 123.7421875, stop = 0, total = 0}, elapsed = {start = 2547348.3359375, stop = 0,
total = 0}, state = RunningTimerState, signature = 2880220587}, progress_monitor = 0, client_data = 0x0, cache = 0x8060ca800, attributes = 0x0, ascii85 = 0x0, blob = 0x804c6f500,
filename = "/var/tmp/magick-CMqGZld1\000%08d\000\060\060\061", '\000' <repeats 4062 times>, magick_filename = "EPI:/var/tmp/magick-CMqGZld1\000\060\060\060\061", '\000' <repeats 4062 times>,
magick = "PNG", '\000' <repeats 4092 times>, magick_columns = 612, magick_rows = 792, exception = {severity = UndefinedException, error_number = 0, reason = 0x0, description = 0x0,
exceptions = 0x806064a40, relinquish = MagickFalse, semaphore = 0x80e7fe9c0, signature = 2880220587}, debug = MagickFalse, reference_count = 1, semaphore = 0x80e7fe480, color_profile = {
name = 0x0, length = 2576, info = 0x8064b5000 "", signature = 0}, iptc_profile = {name = 0x0, length = 0, info = 0x0, signature = 0}, generic_profile = 0x0, generic_profiles = 0,
signature = 2880220587, previous = 0x0, list = 0x0, next = 0x0, interpolate = UndefinedInterpolatePixel, black_point_compensation = MagickFalse, transparent_color = {blue = 0, green = 0, red = 0,
opacity = 65535}, mask = 0x0, tile_offset = {width = 0, height = 0, x = 0, y = 0}, properties = 0x805ff8f80, artifacts = 0x0, type = UndefinedType, dither = MagickTrue, extent = 15536,
ping = MagickFalse, channels = 0}