On my old version, "convert someTiff.tif -crop 60x60+123+231 someTiffCropped.tif" did a traditional crop, which cut out a 60x60 pixel area from a large someTiff.tif file, at the 123, 231 coordinate.
On my new version, the same command crops to a 60x60 pixel area along the lines of the new Photoshop crop, where the other pixels are hidden in out of areas in the image. Results in a huge file.
Additionally, if I load this new version's cropped file in Photoshop CS6, it's showing me the 60x60 pixel area at the 0,0 coordinate -- not the 123, 231 coordinate. Either a bug in IM, libtiff, or PSCS6. Anyways, it doesn't matter to me in the end.

How can I tell ImageMagick/Magick++ to do a more traditional crop and delete the other pixels, rather than non-destructively hiding them? That should fix all my issues...