I use convert in FVWM-Crystal with a bash script to generate the icons used into the application menu. Those icons are generated from the application provided icons. fvwm-crystal.generate-menu
The call to convert is very basic:
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convert -resize 48x48 "input_file" "/path/to/icons/48x48/apps/application_name.png"
At Fvwm-Crystal restart, some of the converted files gave me warnings like:
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libpng warning: Ignoring incorrect gAMA value .55 when sRGB is also present
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convert "/path/to/icons/48x48/apps/application_name.png" "/path/to/icons/48x48/apps/application_name.png"
convert "/path/to/icons/48x48/apps/application_name.png" "/path/to/icons/48x48/apps/application_name.png"
convert "/path/to/icons/48x48/apps/application_name.png" "/path/to/icons/48x48/apps/application_name.png"